Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carnitine 3-dehydrogenase | SAMN05216372_11530 | Not Available | - | 4864704 - 4865669 | 34798.7 |
| uncharacterized conserved protein, duf849 family | SAMN05216372_11531 | Not Available | - | 4865690 - 4866574 | 31486.3 |
| glycine betaine/proline transport system substrate-binding protein | SAMN05216372_11532 | Not Available | - | 4866642 - 4867577 | 33131.7 |
| arac family transcriptional regulator, carnitine catabolism transcriptional activator | SAMN05216372_11533 | Not Available | + | 4867768 - 4868718 | 35440.5 |
| membrane dipeptidase | SAMN05216372_11534 | Not Available | + | 4869109 - 4870086 | 35905.9 |
| hypothetical protein | SAMN05216372_11535 | Not Available | + | 4870206 - 4870736 | 19897.6 |
| 2,4-dienoyl-coa reductase | SAMN05216372_11536 | Not Available | + | 4870821 - 4872881 | 75643.8 |
| fe-s oxidoreductase | SAMN05216372_11537 | Not Available | + | 4873033 - 4874991 | 70555.3 |
| electron transfer flavoprotein alpha subunit apoprotein | SAMN05216372_11538 | Not Available | + | 4875100 - 4876329 | 43520.0 |
| electron transfer flavoprotein beta subunit | SAMN05216372_11539 | Not Available | + | 4876398 - 4877171 | 27131.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.