Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit alpha | SAMN05216372_11520 | Not Available | - | 4851610 - 4854627 | 109263.0 |
| sarcosine oxidase subunit delta | SAMN05216372_11521 | Not Available | - | 4854624 - 4854950 | 12252.3 |
| sarcosine oxidase subunit beta | SAMN05216372_11522 | Not Available | - | 4855006 - 4856256 | 45215.1 |
| serine hydroxymethyltransferase | SAMN05216372_11523 | Not Available | - | 4856388 - 4857641 | 44637.2 |
| trax protein | SAMN05216372_11524 | Not Available | - | 4857868 - 4858602 | 27173.9 |
| hypothetical protein | SAMN05216372_11525 | Not Available | - | 4858703 - 4859002 | 10622.6 |
| l-threonine aldolase | SAMN05216372_11526 | Not Available | + | 4859204 - 4860244 | 38129.0 |
| ferredoxin-nadp reductase | SAMN05216372_11527 | Not Available | - | 4861424 - 4862524 | 40499.5 |
| rieske 2fe-2s family protein | SAMN05216372_11528 | Not Available | + | 4862881 - 4864173 | 48819.2 |
| acyl-coa thioester hydrolase | SAMN05216372_11529 | Not Available | - | 4864237 - 4864701 | 17316.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.