Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase (b12-independent) | SAMN05216372_11467 | Not Available | - | 4794839 - 4797136 | 85937.4 |
| arac-type dna-binding protein | SAMN05216372_11468 | Not Available | + | 4797285 - 4798145 | 32755.6 |
| glycine/d-amino acid oxidase | SAMN05216372_11469 | Not Available | + | 4798191 - 4799597 | 52486.7 |
| hypothetical protein | SAMN05216372_11470 | Not Available | + | 4799770 - 4800111 | 12646.1 |
| putrescine transport system substrate-binding protein | SAMN05216372_11471 | Not Available | + | 4800154 - 4801230 | 39510.5 |
| mannose-6-phosphate isomerase, cupin superfamily | SAMN05216372_11472 | Not Available | - | 4801276 - 4801659 | 14300.1 |
| arac-type dna-binding protein | SAMN05216372_11473 | Not Available | - | 4801709 - 4802533 | 30944.8 |
| predicted co/zn/cd cation transporter, cation efflux family | SAMN05216372_11474 | Not Available | - | 4802647 - 4803573 | 33495.1 |
| predicted arabinose efflux permease, mfs family | SAMN05216372_11475 | Not Available | - | 4803641 - 4804810 | 41506.3 |
| protein of unknown function | SAMN05216372_11476 | Not Available | - | 4804888 - 4805376 | 17561.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.