Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein ccma, bactofilin family | SAMN05216372_11389 | Not Available | + | 4733321 - 4733701 | 13590.3 |
| iron-sulfur cluster insertion apoprotein erpa | SAMN05216372_11390 | Not Available | + | 4733778 - 4734131 | 12539.6 |
| anhydro-n-acetylmuramic acid kinase | SAMN05216372_11391 | Not Available | - | 4734189 - 4735277 | 38516.1 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN05216372_11392 | Not Available | - | 4735282 - 4736697 | 51524.9 |
| tyrosyl-trna synthetase | SAMN05216372_11393 | Not Available | + | 4736908 - 4738107 | 44444.6 |
| hypothetical protein | SAMN05216372_1141 | Not Available | - | 4738538 - 4738665 | 4843.88 |
| hypothetical protein | SAMN05216372_1142 | Not Available | - | 4739021 - 4739212 | 7365.84 |
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN05216372_1143 | Not Available | - | 4739212 - 4739736 | 18407.0 |
| nudix domain-containing protein | SAMN05216372_1144 | Not Available | - | 4739759 - 4740361 | 22609.9 |
| abc-2 type transport system permease protein | SAMN05216372_1145 | Not Available | - | 4740455 - 4741216 | 27885.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.