Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | SAMN05216372_101368 | Not Available | + | 406006 - 407253 | 45307.1 |
| diaminopimelate epimerase | SAMN05216372_101369 | Not Available | + | 407259 - 408089 | 30421.6 |
| hypothetical protein | SAMN05216372_101370 | Not Available | + | 408086 - 408781 | 25603.8 |
| integrase/recombinase xerc | SAMN05216372_101371 | Not Available | + | 408838 - 409740 | 33950.8 |
| putative hydrolase of the had superfamily | SAMN05216372_101372 | Not Available | + | 409737 - 410432 | 25571.3 |
| hypothetical protein | SAMN05216372_101373 | Not Available | - | 410677 - 410997 | 11358.8 |
| secondary thiamine-phosphate synthase enzyme | SAMN05216372_101374 | Not Available | - | 411074 - 411499 | 15960.0 |
| ammonium transporter, amt family | SAMN05216372_101375 | Not Available | - | 411632 - 412885 | 43623.6 |
| ammonium transporter, amt family | SAMN05216372_101376 | Not Available | - | 413004 - 414320 | 45902.9 |
| nitrogen regulatory protein p-ii family | SAMN05216372_101377 | Not Available | - | 414361 - 414699 | 12286.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.