Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN05216372_11349 | Not Available | + | 4690284 - 4691735 | 51299.4 |
| ribulose-5-phosphate 3-epimerase | SAMN05216372_11350 | Not Available | + | 4692023 - 4692697 | 24174.3 |
| phosphoglycolate phosphatase | SAMN05216372_11351 | Not Available | + | 4692694 - 4693374 | 24178.2 |
| anthranilate synthase component 1 | SAMN05216372_11352 | Not Available | + | 4693583 - 4695061 | 53925.8 |
| acetyl-coa/propionyl-coa carboxylase, biotin carboxylase, biotin carboxyl carrier protein | SAMN05216372_11353 | Not Available | - | 4695358 - 4697088 | 61185.7 |
| sensor histidine kinase inhibitor, kipi family | SAMN05216372_11354 | Not Available | - | 4697085 - 4698698 | 56887.6 |
| uncharacterized protein ycsi, upf0317 family | SAMN05216372_11355 | Not Available | - | 4698708 - 4699514 | 28777.3 |
| upf0271 protein | SAMN05216372_11356 | Not Available | - | 4699511 - 4700281 | 26894.2 |
| mn2+ and fe2+ transporters of the nramp family | SAMN05216372_11357 | Not Available | - | 4700294 - 4701526 | 42586.1 |
| dna-binding transcriptional regulator, gntr family | SAMN05216372_11358 | Not Available | + | 4701816 - 4702478 | 24566.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.