Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05216372_11278 | Not Available | - | 4614139 - 4614678 | 19622.9 |
| mfs transporter, aahs family, 3-hydroxyphenylpropionic acid transporter | SAMN05216372_11279 | Not Available | - | 4614691 - 4615908 | 41262.5 |
| outer membrane porin, oprd family | SAMN05216372_11280 | Not Available | + | 4616239 - 4617540 | 47465.1 |
| benzoate transport | SAMN05216372_11281 | Not Available | - | 4617580 - 4618908 | 46465.0 |
| vanillate o-demethylase monooxygenase subunit | SAMN05216372_11282 | Not Available | + | 4619273 - 4620337 | 39741.3 |
| vanillate o-demethylase ferredoxin subunit | SAMN05216372_11283 | Not Available | + | 4620396 - 4621343 | 34400.7 |
| acetyltransferase (gnat) domain-containing protein | SAMN05216372_11284 | Not Available | - | 4621410 - 4621877 | 16468.0 |
| gntr family transcriptional regulator, vanillate catabolism transcriptional regulator | SAMN05216372_11285 | Not Available | - | 4621870 - 4622583 | 26055.0 |
| hypothetical protein | SAMN05216372_11286 | Not Available | - | 4622583 - 4623125 | 20242.9 |
| protein of unknown function | SAMN05216372_11287 | Not Available | - | 4623169 - 4623558 | 14043.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.