Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system atp-binding protein | SAMN05216372_1127 | Not Available | - | 4530704 - 4531735 | 37182.0 |
| putative spermidine/putrescine transport system permease protein | SAMN05216372_1128 | Not Available | - | 4531732 - 4532526 | 28811.5 |
| putative spermidine/putrescine transport system permease protein | SAMN05216372_1129 | Not Available | - | 4532523 - 4533392 | 30285.4 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05216372_11210 | Not Available | - | 4533394 - 4534398 | 36088.2 |
| dna-binding transcriptional regulator, laci/purr family | SAMN05216372_11211 | Not Available | - | 4534395 - 4535402 | 36471.0 |
| prevent-host-death family protein | SAMN05216372_11212 | Not Available | + | 4535564 - 4535821 | 9726.8 |
| plasmid stabilization system protein pare | SAMN05216372_11213 | Not Available | + | 4535809 - 4536105 | 11189.7 |
| predicted zn-dependent protease or its inactivated homolog | SAMN05216372_11214 | Not Available | - | 4536171 - 4537490 | 47910.2 |
| predicted zn-dependent protease or its inactivated homolog | SAMN05216372_11215 | Not Available | - | 4537490 - 4538935 | 52964.3 |
| aaa domain-containing protein, putative abieii toxin, type iv ta system | SAMN05216372_11216 | Not Available | + | 4539194 - 4540705 | 57753.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.