Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gmp synthase-glutamine amidotransferase | SAMN05216372_111124 | Not Available | + | 4520367 - 4521095 | 27134.5 |
| malate dehydrogenase (quinone) | SAMN05216372_111125 | Not Available | - | 4521187 - 4522797 | 59058.4 |
| hypothetical protein | SAMN05216372_111126 | Not Available | - | 4523128 - 4523496 | 12288.1 |
| aldehyde dehydrogenase | SAMN05216372_111127 | Not Available | + | 4523772 - 4524202 | 15201.8 |
| nadp-dependent aldehyde dehydrogenase | SAMN05216372_1121 | Not Available | - | 4524203 - 4525119 | 31666.0 |
| hypothetical protein | SAMN05216372_1122 | Not Available | - | 4525175 - 4526170 | 35953.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05216372_1123 | Not Available | + | 4526284 - 4527204 | 33356.6 |
| c4-dicarboxylate-binding protein dctp | SAMN05216372_1124 | Not Available | - | 4527337 - 4528326 | 36933.3 |
| 16s rrna (guanine1207-n2)-methyltransferase | SAMN05216372_1125 | Not Available | + | 4528628 - 4529749 | 40280.6 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05216372_1126 | Not Available | - | 4529860 - 4530711 | 31055.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.