Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, aahs family, benzoate transport protein | SAMN05216372_11163 | Not Available | + | 4453682 - 4455016 | 47263.2 |
| benzoate membrane transport protein | SAMN05216372_11164 | Not Available | + | 4455109 - 4456323 | 41645.1 |
| outer membrane porin, oprd family | SAMN05216372_11165 | Not Available | + | 4456410 - 4457672 | 46532.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05216372_11166 | Not Available | - | 4457926 - 4458801 | 32567.5 |
| muconate cycloisomerase | SAMN05216372_11167 | Not Available | + | 4459026 - 4460147 | 40023.4 |
| muconolactone d-isomerase | SAMN05216372_11168 | Not Available | + | 4460171 - 4460461 | 11174.5 |
| catechol 1,2-dioxygenase | SAMN05216372_11169 | Not Available | + | 4460519 - 4461448 | 34490.3 |
| arac-type dna-binding protein | SAMN05216372_11170 | Not Available | + | 4461687 - 4462643 | 36227.3 |
| glutaconate coa-transferase subunit a | SAMN05216372_11171 | Not Available | + | 4462780 - 4463631 | 31142.3 |
| glutaconate coa-transferase subunit b | SAMN05216372_11172 | Not Available | + | 4463631 - 4464413 | 27401.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.