Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polar amino acid transport system substrate-binding protein | SAMN05216372_11143 | Not Available | + | 4429511 - 4430323 | 28850.0 |
| amino acid abc transporter membrane protein 1, paat family | SAMN05216372_11144 | Not Available | + | 4430334 - 4430999 | 24271.4 |
| polar amino acid transport system permease protein | SAMN05216372_11145 | Not Available | + | 4430996 - 4431655 | 24386.3 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05216372_11146 | Not Available | + | 4431636 - 4432373 | 27093.9 |
| (s)-ureidoglycine-glyoxylate aminotransferase | SAMN05216372_11147 | Not Available | + | 4432398 - 4433630 | 44533.9 |
| allantoate deiminase | SAMN05216372_11148 | Not Available | + | 4433630 - 4434892 | 44203.6 |
| 3-demethylubiquinone-9 3-methyltransferase | SAMN05216372_11149 | Not Available | - | 4434908 - 4435606 | 25896.3 |
| 5-methylthioadenosine/s-adenosylhomocysteine deaminase | SAMN05216372_11150 | Not Available | - | 4435872 - 4437191 | 47684.5 |
| methylthioribose-1-phosphate isomerase | SAMN05216372_11151 | Not Available | + | 4437316 - 4438386 | 38023.1 |
| dna gyrase subunit a | SAMN05216372_11152 | Not Available | + | 4438611 - 4441418 | 102537.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.