Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN05216372_1113 | Not Available | + | 4387682 - 4389679 | 73395.1 |
| hydrolase, peptidase m42 family | SAMN05216372_1114 | Not Available | - | 4389795 - 4390988 | 43271.0 |
| gnat-family acetyltransferase tigr03103 | SAMN05216372_1115 | Not Available | - | 4391292 - 4393034 | 63794.0 |
| asparagine synthase (glutamine-hydrolysing) | SAMN05216372_1116 | Not Available | - | 4393167 - 4394936 | 65764.6 |
| trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein | SAMN05216372_1117 | Not Available | - | 4395337 - 4397295 | 71430.2 |
| polyphosphate:amp phosphotransferase | SAMN05216372_1118 | Not Available | + | 4397446 - 4398939 | 57777.1 |
| hypothetical protein | SAMN05216372_1119 | Not Available | - | 4398971 - 4399201 | 8906.36 |
| hypothetical protein | SAMN05216372_11110 | Not Available | - | 4399282 - 4399683 | 15205.4 |
| uncharacterized protein | SAMN05216372_11111 | Not Available | - | 4399700 - 4400287 | 22152.8 |
| atp-dependent dna helicase recq | SAMN05216372_11112 | Not Available | + | 4400524 - 4402647 | 78426.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.