Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase | SAMN05216372_11069 | Not Available | - | 4298569 - 4299717 | 41349.5 |
| ycxb-like protein | SAMN05216372_11070 | Not Available | + | 4299966 - 4300508 | 20016.9 |
| hypothetical protein | SAMN05216372_11071 | Not Available | - | 4300505 - 4300804 | 11325.4 |
| hypothetical protein | SAMN05216372_11072 | Not Available | - | 4300811 - 4301713 | 33271.9 |
| predicted arabinose efflux permease, mfs family | SAMN05216372_11073 | Not Available | + | 4301921 - 4303171 | 44112.7 |
| sulfate permease, sulp family | SAMN05216372_11074 | Not Available | - | 4303257 - 4304822 | 56001.6 |
| glycine betaine/proline transport system substrate-binding protein | SAMN05216372_11075 | Not Available | - | 4305184 - 4306113 | 33208.7 |
| choline-sulfatase | SAMN05216372_11076 | Not Available | - | 4306205 - 4307713 | 57188.8 |
| putative choline sulfate-utilization transcription factor | SAMN05216372_11077 | Not Available | + | 4307824 - 4308777 | 35130.4 |
| dopa 4,5-dioxygenase | SAMN05216372_11078 | Not Available | + | 4308774 - 4309133 | 13296.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.