Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polar amino acid transport system substrate-binding protein | SAMN05216372_1108 | Not Available | - | 4234483 - 4235301 | 29397.0 |
| arac-type dna-binding protein | SAMN05216372_1109 | Not Available | - | 4235523 - 4236272 | 27934.7 |
| nadph-dependent 2,4-dienoyl-coa reductase, sulfur reductase | SAMN05216372_11011 | Not Available | - | 4236908 - 4238173 | 44248.9 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | SAMN05216372_11012 | Not Available | - | 4238170 - 4238406 | 8167.03 |
| glycine/d-amino acid oxidase | SAMN05216372_11013 | Not Available | - | 4238399 - 4239514 | 39650.6 |
| 4-hydroxyproline epimerase | SAMN05216372_11014 | Not Available | - | 4239511 - 4240443 | 33423.5 |
| gtp cyclohydrolase i | SAMN05216372_11015 | Not Available | - | 4240557 - 4241450 | 31974.2 |
| transcriptional regulator, trar/dksa family | SAMN05216372_11016 | Not Available | + | 4241530 - 4241934 | 16040.9 |
| gtpase, g3e family | SAMN05216372_11017 | Not Available | + | 4241962 - 4243164 | 45014.4 |
| protein of unknown function | SAMN05216372_11018 | Not Available | + | 4243164 - 4243808 | 23120.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.