Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | SAMN05216372_101318 | Not Available | - | 351896 - 352963 | 38828.8 |
| glutamate synthase (nadph) small subunit | SAMN05216372_101319 | Not Available | - | 353097 - 354515 | 51862.2 |
| glutamate synthase (nadph) large subunit | SAMN05216372_101320 | Not Available | - | 354618 - 359066 | 161922.0 |
| damx protein | SAMN05216372_101321 | Not Available | - | 359270 - 360886 | 56770.3 |
| 3-dehydroquinate synthase | SAMN05216372_101322 | Not Available | - | 360894 - 362000 | 39724.0 |
| shikimate kinase | SAMN05216372_101323 | Not Available | - | 362052 - 362570 | 19272.3 |
| type iv pilus assembly protein pilq | SAMN05216372_101324 | Not Available | - | 362574 - 364754 | 77446.1 |
| type iv pilus assembly protein pilp | SAMN05216372_101325 | Not Available | - | 364809 - 365327 | 18774.7 |
| type iv pilus assembly protein pilo | SAMN05216372_101326 | Not Available | - | 365324 - 365947 | 22945.5 |
| type iv pilus assembly protein piln | SAMN05216372_101327 | Not Available | - | 365944 - 366516 | 21284.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.