Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oligoribonuclease | SAMN05216372_10998 | Not Available | + | 4168763 - 4169305 | 20564.5 |
| epoxyqueuosine reductase | SAMN05216372_10999 | Not Available | - | 4169397 - 4170467 | 40202.8 |
| nad(p)h-hydrate epimerase | SAMN05216372_109100 | Not Available | + | 4170526 - 4172025 | 51236.8 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN05216372_109101 | Not Available | + | 4172013 - 4172480 | 16557.9 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05216372_109102 | Not Available | + | 4172477 - 4173919 | 51119.5 |
| dna mismatch repair protein mutl | SAMN05216372_109103 | Not Available | + | 4173916 - 4175790 | 68977.4 |
| trna dimethylallyltransferase | SAMN05216372_109104 | Not Available | + | 4176005 - 4176961 | 35269.6 |
| rna-binding protein hfq | SAMN05216372_109105 | Not Available | + | 4177073 - 4177333 | 9568.5 |
| gtp-binding protein hflx | SAMN05216372_109106 | Not Available | + | 4177348 - 4178649 | 48943.5 |
| membrane protease subunit hflk | SAMN05216372_109107 | Not Available | + | 4178748 - 4179938 | 43404.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.