Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-independent rna helicase dbpa | SAMN05216372_10967 | Not Available | - | 4131292 - 4132671 | 49498.4 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05216372_10968 | Not Available | - | 4132745 - 4134160 | 50406.4 |
| choline dehydrogenase | SAMN05216372_10969 | Not Available | - | 4134270 - 4135979 | 62601.0 |
| betaine aldehyde dehydrogenase | SAMN05216372_10970 | Not Available | - | 4136143 - 4137615 | 53497.6 |
| transcriptional regulator, tetr family | SAMN05216372_10971 | Not Available | - | 4138165 - 4138755 | 21935.5 |
| two-component system, ompr family, kdp operon response regulator kdpe | SAMN05216372_10972 | Not Available | - | 4139137 - 4139820 | 25109.5 |
| two-component system, ompr family, sensor histidine kinase kdpd | SAMN05216372_10973 | Not Available | - | 4139817 - 4141343 | 55607.0 |
| kup system potassium uptake protein | SAMN05216372_10974 | Not Available | + | 4141513 - 4143387 | 67885.9 |
| methyltransferase domain-containing protein | SAMN05216372_10975 | Not Available | - | 4143824 - 4144459 | 23751.9 |
| dna polymerase-2 | SAMN05216372_10976 | Not Available | + | 4144561 - 4146918 | 89231.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.