Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 9 (heptosyltransferase) | SAMN05216372_10926 | Not Available | + | 4085166 - 4086125 | 35396.9 |
| lipopolysaccharide kinase (kdo/waap) family protein | SAMN05216372_10927 | Not Available | + | 4086136 - 4086867 | 28360.3 |
| lipopolysaccharide kinase (kdo/waap) family protein | SAMN05216372_10928 | Not Available | + | 4086864 - 4087607 | 28787.5 |
| lipopolysaccharide kinase (kdo/waap) family protein | SAMN05216372_10929 | Not Available | + | 4087607 - 4089052 | 54327.8 |
| carbamoyltransferase | SAMN05216372_10930 | Not Available | + | 4089065 - 4090819 | 65817.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05216372_10931 | Not Available | + | 4090806 - 4091930 | 41141.7 |
| hypothetical protein | SAMN05216372_10932 | Not Available | + | 4091966 - 4093195 | 46030.7 |
| capsular polysaccharide export protein | SAMN05216372_10933 | Not Available | + | 4093347 - 4094456 | 42619.6 |
| o-antigen ligase | SAMN05216372_10934 | Not Available | + | 4094404 - 4095657 | 46088.7 |
| 1,5-rhamnosyltransferase | SAMN05216372_10935 | Not Available | + | 4095697 - 4096641 | 35939.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.