Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | SAMN05216372_101137 | Not Available | - | 159171 - 161198 | 73067.1 |
| uncharacterized conserved protein | SAMN05216372_101138 | Not Available | - | 161297 - 161797 | 18396.8 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05216372_101139 | Not Available | - | 162003 - 162737 | 26897.8 |
| polar amino acid transport system permease protein | SAMN05216372_101140 | Not Available | - | 162730 - 163692 | 35040.5 |
| polar amino acid transport system substrate-binding protein | SAMN05216372_101141 | Not Available | - | 163779 - 164570 | 29366.6 |
| d-tyrosyl-trna(tyr) deacylase | SAMN05216372_101142 | Not Available | - | 164775 - 165212 | 15352.6 |
| proline iminopeptidase | SAMN05216372_101143 | Not Available | - | 165209 - 166180 | 36381.1 |
| hypothetical protein | SAMN05216372_101144 | Not Available | + | 166263 - 166481 | 8329.86 |
| apolipoprotein d and lipocalin family protein | SAMN05216372_101145 | Not Available | - | 166729 - 167292 | 21047.7 |
| beta-barrel assembly machine subunit bame | SAMN05216372_101146 | Not Available | - | 167292 - 167546 | 8984.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.