Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zape | SAMN05216372_102173 | Not Available | - | 1104419 - 1105549 | 42288.6 |
| protocatechuate 3,4-dioxygenase alpha subunit | SAMN05216372_102174 | Not Available | - | 1105539 - 1106147 | 22286.2 |
| protocatechuate 3,4-dioxygenase beta subunit | SAMN05216372_102175 | Not Available | - | 1106158 - 1106871 | 26770.0 |
| alginate export | SAMN05216372_102176 | Not Available | + | 1107215 - 1108540 | 48155.8 |
| hypothetical protein | SAMN05216372_102177 | Not Available | - | 1108641 - 1109651 | 36068.2 |
| protein of unknown function duf2625 | SAMN05216372_102178 | Not Available | - | 1109710 - 1110351 | 23354.4 |
| glutathione s-transferase | SAMN05216372_102179 | Not Available | - | 1110441 - 1111058 | 22813.4 |
| transcriptional regulator, hxlr family | SAMN05216372_102180 | Not Available | + | 1111128 - 1111538 | 15208.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05216372_102181 | Not Available | - | 1111599 - 1112396 | 28469.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05216372_102182 | Not Available | - | 1112396 - 1113172 | 28250.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.