Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas amygdali
Accession NumberLJPQ00000000.1
Gene Summary
Adenine Count
1237986 bp
Thymine Count
1240147 bp
Guanine Count
1724261 bp
Cytosine Count
1731944 bp
Genome Length
5934781 bp
Protein-coding Genes
5276 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein spar/ysct/hrct | ALO51_01270 | Not Available | - | 5562429 - 5563223 | 28334.9 |
| type iii secretion component protein hrcs | ALO51_01271 | P69982 | - | 5563224 - 5563490 | 9407.06 |
| type iii secretion system protein yscr | ALO51_01272 | Q60236 | - | 5563498 - 5564151 | 24185.6 |
| type iii secretion protein hrcqb | ALO51_01273 | O85094 | - | 5564148 - 5564537 | 14234.3 |
| type iii secretion protein hrcqa | ALO51_01274 | O85093 | - | 5564527 - 5565243 | 25945.1 |
| type iii secretion protein hrpp | ALO51_01275 | Not Available | - | 5565240 - 5565812 | 20381.1 |
| type iii secretion component protein hrpo | ALO51_01276 | Not Available | - | 5565819 - 5566265 | 17353.6 |
| hrcn | ALO51_01277 | Q8RK01 | - | 5566268 - 5567617 | 48356.5 |
| type iii secretion apparatus protein, yscd/hrpq family | ALO51_01278 | Not Available | - | 5567614 - 5568588 | 35309.1 |
| type iii secretion component protein hrcv | ALO51_01279 | P35655 | - | 5568622 - 5570709 | 76576.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
