Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas amygdali
Accession NumberLJPQ00000000.1
Gene Summary
Adenine Count
1237986 bp
Thymine Count
1240147 bp
Guanine Count
1724261 bp
Cytosine Count
1731944 bp
Genome Length
5934781 bp
Protein-coding Genes
5276 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-xylose abc transporter periplasmic-d xylose binding protein | ALO51_05399 | P37387 | - | 422220 - 423449 | 44445.6 |
| xylose isomerase | ALO51_04110 | Q48J73 | - | 423361 - 424677 | 49051.6 |
| helix-turn-helix, arac type:periplasmic binding protein/laci transcriptional regulator | ALO51_04111 | P0ACI5 | + | 424860 - 426059 | 43745.8 |
| papain cysteine protease family protein | ALO51_05400 | Q5UQE9 | - | 426064 - 426915 | 32214.5 |
| uncharacterized protein | ALO51_04113 | Not Available | + | 427233 - 427685 | 16709.8 |
| o-methyltransferase involved in polyketide biosynthesi | ALO51_102452 | Not Available | + | 427890 - 428003 | 4211.17 |
| virk protein | ALO51_04114 | P55686 | - | 428007 - 428438 | 15089.9 |
| methyl-accepting chemotaxis protein | ALO51_04115 | Not Available | + | 428647 - 430275 | 58013.8 |
| hypothetical protein | ALO51_102604 | Not Available | - | 430272 - 430511 | 8371.11 |
| ribose abc transporter periplasmic ribose-binding protein | ALO51_05401 | Not Available | + | 430492 - 431496 | 35896.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
