Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas agarici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas agarici str. NCPPB 2472
Accession NumberNZ_CP014135.1
Gene Summary
Adenine Count
1124072 bp
Thymine Count
1128810 bp
Guanine Count
1619969 bp
Cytosine Count
1619986 bp
Genome Length
5502003 bp
Protein-coding Genes
4844 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system-associated protein tagf | AWM79_RS02680 | Not Available | - | 572973 - 573626 | 23028.7 |
| type vi secretion system membrane subunit tssm | AWM79_RS02685 | Not Available | - | 573623 - 577126 | 128593.0 |
| dotu family type vi secretion system protein | AWM79_RS02690 | Not Available | - | 577123 - 578448 | 48118.9 |
| type vi secretion system baseplate subunit tssk | AWM79_RS02695 | Not Available | - | 578455 - 579789 | 48573.2 |
| type vi secretion system lipoprotein tssj | AWM79_RS02700 | Not Available | - | 579805 - 580302 | 17653.1 |
| type vi secretion system-associated fha domain protein tagh | AWM79_RS02705 | Not Available | - | 580393 - 581790 | 50708.4 |
| type vi secretion system protein tssa | AWM79_RS02710 | Not Available | + | 582189 - 583217 | 36862.5 |
| type vi secretion system contractile sheath small subunit | AWM79_RS02715 | Not Available | + | 583299 - 583814 | 18718.4 |
| type vi secretion system contractile sheath large subunit | AWM79_RS02720 | Not Available | + | 583830 - 585323 | 55546.4 |
| type vi secretion system tube protein hcp | AWM79_RS02725 | Not Available | + | 585407 - 585895 | 17708.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
