Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas agarici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas agarici str. NCPPB 2472
Accession NumberNZ_CP014135.1
Gene Summary
Adenine Count
1124072 bp
Thymine Count
1128810 bp
Guanine Count
1619969 bp
Cytosine Count
1619986 bp
Genome Length
5502003 bp
Protein-coding Genes
4844 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein icmf/tssm n-terminal domain-containing protein | AWM79_RS21510 | Not Available | - | 4917674 - 4921576 | 144044.0 |
| type ivb secretion system protein icmh/dotu | AWM79_RS21515 | Not Available | - | 4921607 - 4922320 | 26700.1 |
| type vi secretion system baseplate subunit tssk | AWM79_RS21520 | Not Available | - | 4922317 - 4923660 | 50432.6 |
| type vi secretion system lipoprotein tssj | AWM79_RS21525 | Not Available | - | 4923657 - 4924340 | 24555.3 |
| type vi secretion system atpase tssh | AWM79_RS21530 | Not Available | - | 4924399 - 4926996 | 95261.5 |
| type vi secretion system baseplate subunit tssg | AWM79_RS21535 | Not Available | - | 4926993 - 4928063 | 40974.4 |
| type vi secretion system baseplate subunit tssf | AWM79_RS21540 | Not Available | - | 4928027 - 4929859 | 69666.9 |
| type vi secretion system baseplate subunit tsse | AWM79_RS21545 | Not Available | - | 4929859 - 4930341 | 18094.8 |
| type vi secretion system contractile sheath large subunit | AWM79_RS21550 | Not Available | - | 4930366 - 4931868 | 56069.3 |
| type vi secretion system contractile sheath small subunit | AWM79_RS21555 | Not Available | - | 4931879 - 4932412 | 20080.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
