Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas agarici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas agarici str. NCPPB 2472
Accession NumberNZ_CP014135.1
Gene Summary
Adenine Count
1124072 bp
Thymine Count
1128810 bp
Guanine Count
1619969 bp
Cytosine Count
1619986 bp
Genome Length
5502003 bp
Protein-coding Genes
4844 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| secretin and tonb n-terminal domain-containing protein | AWM79_RS00350 | Not Available | - | 86634 - 88559 | 69303.0 |
| hypothetical protein | AWM79_RS00355 | Not Available | - | 88590 - 89093 | 17838.8 |
| hypothetical protein | AWM79_RS00360 | Not Available | - | 89090 - 89647 | 20666.3 |
| hypothetical protein | AWM79_RS00365 | Not Available | - | 89662 - 90204 | 20695.2 |
| hypothetical protein | AWM79_RS00370 | Not Available | - | 90204 - 90950 | 28041.6 |
| gspe/pule family protein | AWM79_RS00375 | Not Available | - | 90931 - 92565 | 59414.1 |
| type ii secretion system f family protein | AWM79_RS00380 | Not Available | - | 92570 - 93748 | 43200.7 |
| lytic transglycosylase domain-containing protein | AWM79_RS00385 | Not Available | - | 93745 - 94239 | 18059.6 |
| type ii secretion system major pseudopilin gspg | AWM79_RS00390 | Not Available | - | 94257 - 94697 | 15914.2 |
| lytic polysaccharide monooxygenase | AWM79_RS00395 | Not Available | - | 94974 - 96551 | 57749.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
