Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae
Accession NumberQSEF00000000.1
Gene Summary
Adenine Count
1264720 bp
Thymine Count
1264835 bp
Guanine Count
1060843 bp
Cytosine Count
1049142 bp
Genome Length
4639540 bp
Protein-coding Genes
3278 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| group ii intron reverse transcriptase/maturase | DW030_17685 | Not Available | + | 4151143 - 4152405 | 49339.8 |
| xre family transcriptional regulator | DW030_17690 | Not Available | + | 4152674 - 4152988 | 11812.6 |
| type ii toxin-antitoxin system hipa family toxin | DW030_17695 | Not Available | + | 4152985 - 4154283 | 48692.0 |
| abc transporter permease | DW030_17710 | Not Available | - | 4155826 - 4158195 | 88132.3 |
| helix-turn-helix domain-containing protein | DW030_17720 | Not Available | - | 4158538 - 4158723 | 6912.62 |
| is1182 family transposase | DW030_17725 | Not Available | + | 4158874 - 4160541 | 65395.9 |
| helix-turn-helix domain-containing protein | DW030_17730 | Not Available | + | 4160782 - 4161090 | 11661.6 |
| dna methylase | DW030_17755 | Not Available | - | 4166896 - 4170632 | 141858.0 |
| duf1896 domain-containing protein | DW030_17760 | Not Available | - | 4170622 - 4171209 | 22268.0 |
| type ia dna topoisomerase | DW030_17765 | Not Available | - | 4171237 - 4173324 | 77608.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
