Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae
Accession NumberQSEF00000000.1
Gene Summary
Adenine Count
1264720 bp
Thymine Count
1264835 bp
Guanine Count
1060843 bp
Cytosine Count
1049142 bp
Genome Length
4639540 bp
Protein-coding Genes
3278 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase | DW030_15345 | Not Available | - | 3641778 - 3642821 | 37921.3 |
| duf4976 domain-containing protein | DW030_15350 | Not Available | - | 3642902 - 3644344 | 54807.4 |
| glycoside hydrolase family 95 protein | DW030_15355 | Not Available | - | 3644355 - 3646889 | 95445.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW030_15360 | Not Available | - | 3646977 - 3648680 | 65291.8 |
| susc/raga family tonb-linked outer membrane protein | DW030_15365 | Not Available | - | 3648693 - 3652031 | 124838.0 |
| fecr family protein | DW030_15370 | Not Available | - | 3652189 - 3653181 | 38194.4 |
| rna polymerase sigma-70 factor | DW030_15375 | Not Available | - | 3653248 - 3653802 | 22151.6 |
| sigma-54-dependent fis family transcriptional regulator | DW030_15380 | Not Available | + | 3654083 - 3655417 | 49502.0 |
| ghkl domain-containing protein | DW030_15385 | Not Available | + | 3655430 - 3656482 | 39647.4 |
| duf3108 domain-containing protein | DW030_15390 | Not Available | - | 3656486 - 3657373 | 34942.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
