Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae
Accession NumberQSEF00000000.1
Gene Summary
Adenine Count
1264720 bp
Thymine Count
1264835 bp
Guanine Count
1060843 bp
Cytosine Count
1049142 bp
Genome Length
4639540 bp
Protein-coding Genes
3278 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DW030_15175 | Not Available | + | 3585444 - 3588530 | 114948.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW030_15180 | Not Available | + | 3588554 - 3590221 | 62690.5 |
| hypothetical protein | DW030_15185 | Not Available | + | 3590316 - 3591800 | 56489.1 |
| beta-glycosidase | DW030_15190 | Not Available | + | 3591784 - 3594666 | 108524.0 |
| hypothetical protein | DW030_15195 | Not Available | - | 3594792 - 3595577 | 29633.9 |
| hypothetical protein | DW030_15200 | Not Available | + | 3595672 - 3596571 | 34317.8 |
| rna polymerase sigma-70 factor | DW030_15205 | Not Available | + | 3596577 - 3597191 | 24136.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW030_15220 | Not Available | + | 3601639 - 3603369 | 66769.6 |
| glycoside hydrolase | DW030_15225 | Not Available | + | 3603389 - 3604363 | 36804.2 |
| glycoside hydrolase | DW030_15230 | Not Available | + | 3604512 - 3605507 | 37284.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
