Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae
Accession NumberQSEF00000000.1
Gene Summary
Adenine Count
1264720 bp
Thymine Count
1264835 bp
Guanine Count
1060843 bp
Cytosine Count
1049142 bp
Genome Length
4639540 bp
Protein-coding Genes
3278 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | DW030_14170 | Not Available | + | 3350762 - 3351511 | 27404.3 |
| rida family protein | DW030_14175 | Not Available | + | 3351533 - 3351913 | 13244.9 |
| ygiq family radical sam protein | DW030_14180 | Not Available | - | 3352025 - 3353839 | 69324.8 |
| malate dehydrogenase | DW030_14185 | Not Available | + | 3354045 - 3355046 | 35671.2 |
| chloramphenicol acetyltransferase | DW030_14190 | Not Available | - | 3355150 - 3355782 | 24208.7 |
| s9 family peptidase | DW030_14195 | Not Available | - | 3355794 - 3358286 | 93627.4 |
| class i sam-dependent methyltransferase | DW030_14200 | Not Available | - | 3358300 - 3358884 | 21925.4 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DW030_14205 | Not Available | - | 3358881 - 3359690 | 29314.6 |
| hypothetical protein | DW030_14210 | Not Available | + | 3360534 - 3360827 | 11512.3 |
| ribonuclease p | DW030_14215 | Not Available | + | 3360833 - 3361015 | 6688.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
