Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae
Accession NumberQSEF00000000.1
Gene Summary
Adenine Count
1264720 bp
Thymine Count
1264835 bp
Guanine Count
1060843 bp
Cytosine Count
1049142 bp
Genome Length
4639540 bp
Protein-coding Genes
3278 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DWZ59_07530 | Not Available | + | 1713300 - 1715132 | 69894.9 |
| duf3823 domain-containing protein | DWZ59_07535 | Not Available | + | 1715149 - 1715823 | 24490.2 |
| duf4965 domain-containing protein | DWZ59_07540 | Not Available | + | 1716024 - 1718981 | 111766.0 |
| beta-galactosidase | DWZ59_07545 | Not Available | + | 1719018 - 1720829 | 68302.9 |
| beta-glucuronidase | DWZ59_07550 | Not Available | + | 1720834 - 1722687 | 71125.1 |
| duf4290 domain-containing protein | DWZ59_07555 | Not Available | + | 1723285 - 1723887 | 24007.9 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DWZ59_07560 | Not Available | + | 1723884 - 1725188 | 47144.4 |
| 16s rrna processing protein rimm | DWZ59_07565 | Not Available | + | 1725200 - 1725721 | 19634.1 |
| m23 family peptidase | DWZ59_07570 | Not Available | + | 1725737 - 1726609 | 32906.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DWZ59_07575 | Not Available | + | 1726615 - 1727766 | 42074.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
