Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae
Accession NumberQSEF00000000.1
Gene Summary
Adenine Count
1264720 bp
Thymine Count
1264835 bp
Guanine Count
1060843 bp
Cytosine Count
1049142 bp
Genome Length
4639540 bp
Protein-coding Genes
3278 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna recombination protein rmuc | DWZ59_07310 | Not Available | - | 1649243 - 1650517 | 48254.1 |
| thiol peroxidase | DWZ59_07315 | Not Available | + | 1650678 - 1651181 | 17822.6 |
| dna-binding response regulator | DWZ59_07325 | Not Available | - | 1651451 - 1652143 | 26648.4 |
| sensor histidine kinase | DWZ59_07330 | Not Available | - | 1652112 - 1653629 | 58244.3 |
| hypothetical protein | DWZ59_07335 | Not Available | + | 1653782 - 1655926 | 81177.5 |
| hu family dna-binding protein | DWZ59_07340 | Not Available | + | 1656227 - 1656613 | 14125.0 |
| helicase | DWZ59_07345 | Not Available | + | 1656760 - 1658847 | 79918.8 |
| crispr-associated helicase/endonuclease cas3 | DWZ59_07350 | Not Available | + | 1658975 - 1661200 | 83303.0 |
| crispr-associated endonuclease cas2 | DWZ59_07355 | Not Available | - | 1663837 - 1664127 | 11266.4 |
| type i-c crispr-associated endonuclease cas1 | DWZ59_07360 | Not Available | - | 1664132 - 1665166 | 38878.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
