Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae
Accession NumberQSEF00000000.1
Gene Summary
Adenine Count
1264720 bp
Thymine Count
1264835 bp
Guanine Count
1060843 bp
Cytosine Count
1049142 bp
Genome Length
4639540 bp
Protein-coding Genes
3278 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide biosynthesis protein | DWZ59_06500 | Not Available | - | 1464445 - 1465734 | 47279.7 |
| m20/m25/m40 family metallo-hydrolase | DWZ59_06505 | Not Available | - | 1465789 - 1466844 | 38965.4 |
| riboflavin biosynthesis protein ribf | DWZ59_06510 | Not Available | - | 1466854 - 1467780 | 34733.8 |
| hypothetical protein | DWZ59_06515 | Not Available | + | 1467908 - 1471057 | 119136.0 |
| rna polymerase sigma-70 factor | DWZ59_06520 | Not Available | + | 1471084 - 1471626 | 21570.4 |
| duf4974 domain-containing protein | DWZ59_06525 | Not Available | + | 1472275 - 1473255 | 37313.2 |
| susc/raga family tonb-linked outer membrane protein | DWZ59_06530 | Not Available | + | 1473414 - 1476893 | 127788.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWZ59_06535 | Not Available | + | 1476926 - 1478398 | 55536.6 |
| hypothetical protein | DWZ59_06540 | Not Available | + | 1478484 - 1479671 | 45326.7 |
| duf4832 domain-containing protein | DWZ59_06545 | Not Available | + | 1479673 - 1481244 | 59513.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
