Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae
Accession NumberQSEF00000000.1
Gene Summary
Adenine Count
1264720 bp
Thymine Count
1264835 bp
Guanine Count
1060843 bp
Cytosine Count
1049142 bp
Genome Length
4639540 bp
Protein-coding Genes
3278 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| formate-dependent phosphoribosylglycinamide formyltransferase | DWZ59_05730 | Not Available | + | 1275784 - 1276965 | 43207.1 |
| mbl fold metallo-hydrolase | DWZ59_05735 | Not Available | + | 1277064 - 1277786 | 27773.8 |
| lactoylglutathione lyase | DWZ59_05740 | Not Available | + | 1277815 - 1278192 | 14850.4 |
| rok family protein | DWZ59_05745 | Not Available | + | 1278313 - 1279275 | 33872.9 |
| nudix domain-containing protein | DWZ59_05750 | Not Available | + | 1279379 - 1279894 | 19174.7 |
| outer membrane protein assembly factor bamd | DWZ59_05755 | Not Available | + | 1279977 - 1282976 | 114466.0 |
| tonb-dependent receptor | DWZ59_05760 | Not Available | + | 1282986 - 1284737 | 65375.3 |
| mate family efflux transporter | DWZ59_05765 | Not Available | + | 1284956 - 1286284 | 48073.0 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DWZ59_05770 | Not Available | + | 1286348 - 1287625 | 46554.5 |
| glycosyltransferase | DWZ59_05775 | Not Available | - | 1287762 - 1288916 | 43848.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
