Sphingobium chlorophenolicum str. NBRC 16172

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium chlorophenolicum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium chlorophenolicum str. NBRC 16172

Accession NumberJFHR00000000.1

Gene Summary

Adenine Count

856483 bp

Thymine Count

856435 bp

Guanine Count

1540788 bp

Cytosine Count

1542416 bp

Genome Length

4796122 bp

Protein-coding Genes

4481 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
transposase is66 family proteinBV95_00539Not Available-555866 - 55742556815.9
is66 orf2 like family proteinBV95_00540Not Available-557481 - 55782812711.7
transposase family proteinBV95_00541Not Available-557825 - 55824414759.8
ggdef domain proteinBV95_00542Not Available-558307 - 55869613827.2
hypothetical proteinBV95_00543Not Available-558674 - 55895810410.2
hypothetical proteinBV95_00544Not Available-559099 - 55943112255.9
putative membrane proteinBV95_00545Not Available+560230 - 56055310341.9
type iv conjugative transfer system protein tralBV95_00546Not Available+560594 - 56087810707.3
trae family proteinBV95_00547Not Available+560879 - 56146621416.1
hypothetical proteinBV95_00548Not Available+561463 - 56227527907.3

Displaying genes 541 – 550 of 4541 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00086222-(glutathione-S-yl)-hydroquinoneC16H20N3O8SChemical structure of 2-(glutathione-S-yl)-hydroquinoneNot available
Average414.41Da
Monoisotopic414.0976594Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm00177315,10-MethenyltetrahydrofolateC20H22N7O6Chemical structure of 5,10-Methenyltetrahydrofolate7444-29-3
Average456.432Da
Monoisotopic456.163156471Da

Displaying 1–5 of 5 metabolites