Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudobutyrivibrio ruminis
Accession NumberPDYH00000000.1
Gene Summary
Adenine Count
886960 bp
Thymine Count
912208 bp
Guanine Count
548976 bp
Cytosine Count
584621 bp
Genome Length
2932765 bp
Protein-coding Genes
2628 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arginine decarboxylase | CSX00_04730 | Not Available | - | 1050298 - 1051746 | 53235.3 |
| nitrate abc transporter permease | CSX00_04735 | Not Available | - | 1051826 - 1052590 | 28340.5 |
| abc transporter atp-binding protein | CSX00_04740 | Not Available | - | 1052602 - 1053672 | 40131.1 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | CSX00_04745 | Not Available | - | 1053694 - 1054389 | 25657.1 |
| hypothetical protein | CSX00_04750 | Not Available | - | 1054346 - 1055746 | 50645.8 |
| pyridoxamine 5'-phosphate oxidase family protein | CSX00_04755 | Not Available | - | 1055762 - 1056196 | 16296.2 |
| hypothetical protein | CSX00_04760 | Not Available | - | 1056209 - 1057255 | 38874.1 |
| nitrogen fixation protein nifb | CSX00_04765 | Not Available | - | 1057330 - 1058598 | 47849.1 |
| nitrogenase molybdenum-iron protein | CSX00_04770 | Not Available | - | 1058505 - 1059950 | 53249.1 |
| nitrogenase molybdenum-iron protein | CSX00_04775 | Not Available | - | 1059950 - 1061344 | 51763.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.