Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudobutyrivibrio ruminis
Accession NumberPDYH00000000.1
Gene Summary
Adenine Count
886960 bp
Thymine Count
912208 bp
Guanine Count
548976 bp
Cytosine Count
584621 bp
Genome Length
2932765 bp
Protein-coding Genes
2628 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfate abc transporter permease subunit cyst | CSX00_04680 | Not Available | - | 1039418 - 1040251 | 30108.7 |
| sulfate abc transporter substrate-binding protein | CSX00_04685 | Not Available | - | 1040314 - 1041399 | 39572.5 |
| glutamate-1-semialdehyde-2,1-aminomutase | CSX00_04690 | Not Available | - | 1041540 - 1042796 | 45010.7 |
| porphobilinogen synthase | CSX00_04695 | Not Available | - | 1042798 - 1043769 | 36061.4 |
| glutamyl-trna reductase | CSX00_04700 | Not Available | - | 1043756 - 1044880 | 42546.0 |
| n-carbamoylputrescine amidase | CSX00_04705 | Not Available | - | 1044975 - 1045850 | 33074.3 |
| agmatine deiminase | CSX00_04710 | Not Available | - | 1045871 - 1046974 | 41084.2 |
| carboxynorspermidine decarboxylase | CSX00_04715 | Not Available | - | 1046984 - 1048129 | 42536.0 |
| saccharopine dehydrogenase | CSX00_04720 | Not Available | - | 1048149 - 1049408 | 46809.8 |
| polyamine aminopropyltransferase | CSX00_04725 | Not Available | - | 1049426 - 1050298 | 33916.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.