Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudobutyrivibrio ruminis
Accession NumberPDYH00000000.1
Gene Summary
Adenine Count
886960 bp
Thymine Count
912208 bp
Guanine Count
548976 bp
Cytosine Count
584621 bp
Genome Length
2932765 bp
Protein-coding Genes
2628 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mannonate dehydratase | CSX00_04020 | Not Available | + | 893094 - 894167 | 40736.6 |
| mannitol dehydrogenase | CSX00_04025 | Not Available | + | 894172 - 895668 | 55717.1 |
| glucuronate isomerase | CSX00_04030 | Not Available | + | 895665 - 897065 | 53322.6 |
| sugar kinase | CSX00_04035 | Not Available | + | 897090 - 898187 | 39851.4 |
| c4-dicarboxylate abc transporter substrate-binding protein | CSX00_04040 | Not Available | + | 898463 - 899509 | 37876.5 |
| trap transporter small permease | CSX00_04045 | Not Available | + | 899522 - 900046 | 19849.1 |
| hypothetical protein | CSX00_04050 | Not Available | + | 900046 - 901341 | 45343.0 |
| sensor histidine kinase | CSX00_04055 | Not Available | + | 901419 - 902948 | 58060.3 |
| dna-binding response regulator | CSX00_04060 | Not Available | + | 902923 - 903708 | 30014.6 |
| c4-dicarboxylate abc transporter | CSX00_04065 | Not Available | + | 903705 - 904715 | 38485.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.