Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudobutyrivibrio ruminis
Accession NumberPDYH00000000.1
Gene Summary
Adenine Count
886960 bp
Thymine Count
912208 bp
Guanine Count
548976 bp
Cytosine Count
584621 bp
Genome Length
2932765 bp
Protein-coding Genes
2628 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator | CSX00_03165 | Not Available | - | 713895 - 714275 | 14464.8 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | CSX00_03170 | Not Available | + | 714396 - 715460 | 38717.9 |
| hypothetical protein | CSX00_03175 | Not Available | - | 715461 - 716783 | 48366.4 |
| hit family protein | CSX00_03180 | Not Available | - | 716805 - 717221 | 15307.4 |
| scp-2 sterol transfer family protein | CSX00_03185 | Not Available | - | 717245 - 718240 | 37787.1 |
| rhomboid family intramembrane serine protease | CSX00_03190 | Not Available | - | 718243 - 718824 | 21031.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | CSX00_03195 | Not Available | - | 718925 - 719818 | 32545.7 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | CSX00_03200 | Not Available | - | 719805 - 721277 | 54038.7 |
| diaminopimelate epimerase | CSX00_03205 | Not Available | - | 721323 - 722156 | 30651.3 |
| arac family transcriptional regulator | CSX00_03210 | Not Available | + | 722316 - 723173 | 32565.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.