Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudobutyrivibrio ruminis
Accession NumberPDYH00000000.1
Gene Summary
Adenine Count
886960 bp
Thymine Count
912208 bp
Guanine Count
548976 bp
Cytosine Count
584621 bp
Genome Length
2932765 bp
Protein-coding Genes
2628 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamate/gamma-aminobutyrate family transporter yjem | CSX00_03115 | Not Available | - | 702568 - 704127 | 56725.3 |
| lysine--trna ligase | CSX00_03120 | Not Available | - | 704384 - 706411 | 76262.6 |
| mate family efflux transporter | CSX00_03125 | Not Available | - | 706507 - 707889 | 50170.3 |
| transcription elongation factor grea | CSX00_03130 | Not Available | - | 707981 - 708460 | 17795.0 |
| trna dihydrouridine synthase dusb | CSX00_03135 | Not Available | - | 708604 - 709578 | 36050.7 |
| pantothenate kinase | CSX00_03140 | Not Available | - | 709581 - 710351 | 27790.6 |
| hypothetical protein | CSX00_03145 | Not Available | - | 710355 - 710681 | 12490.0 |
| biotin--[acetyl-coa-carboxylase] ligase | CSX00_03150 | Not Available | - | 710705 - 711472 | 28510.9 |
| ornithine carbamoyltransferase | CSX00_03155 | Not Available | - | 711465 - 712460 | 37201.6 |
| spore cortex-lytic protein | CSX00_03160 | Not Available | - | 712579 - 713787 | 42472.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.