Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudobutyrivibrio ruminis
Accession NumberPDYH00000000.1
Gene Summary
Adenine Count
886960 bp
Thymine Count
912208 bp
Guanine Count
548976 bp
Cytosine Count
584621 bp
Genome Length
2932765 bp
Protein-coding Genes
2628 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit sece | CSX00_02660 | Not Available | - | 601052 - 601249 | 6909.59 |
| 50s ribosomal protein l33 | CSX00_02665 | Not Available | - | 601268 - 601417 | 6052.46 |
| hypothetical protein | CSX00_02670 | Not Available | - | 601605 - 602294 | 24163.4 |
| carbohydrate abc transporter permease | CSX00_02675 | Not Available | - | 602436 - 603290 | 31596.6 |
| sugar abc transporter permease | CSX00_02680 | Not Available | - | 603351 - 604271 | 34491.4 |
| abc transporter substrate-binding protein | CSX00_02685 | Not Available | - | 604366 - 605769 | 51203.9 |
| laci family transcriptional regulator | CSX00_02690 | Not Available | - | 605903 - 606916 | 37795.1 |
| glycosyl transferase | CSX00_02695 | Not Available | + | 607251 - 609686 | 91521.6 |
| rna pseudouridine synthase | CSX00_02700 | Not Available | + | 609810 - 610694 | 33359.9 |
| molecular chaperone dnaj | CSX00_02705 | Not Available | - | 610736 - 611188 | 17962.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.