Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudobutyrivibrio ruminis
Accession NumberPDYH00000000.1
Gene Summary
Adenine Count
886960 bp
Thymine Count
912208 bp
Guanine Count
548976 bp
Cytosine Count
584621 bp
Genome Length
2932765 bp
Protein-coding Genes
2628 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3237 domain-containing protein | CSX00_01895 | Not Available | - | 416967 - 417368 | 14653.5 |
| transketolase | CSX00_01900 | Not Available | - | 417465 - 418403 | 33024.8 |
| transketolase | CSX00_01905 | Not Available | - | 418406 - 419230 | 29755.2 |
| hypothetical protein | CSX00_01910 | Not Available | - | 419282 - 420709 | 53527.2 |
| Trna-phe | Not Available | Not Available | + | 421001 - 421076 | Not Available |
| Trna-met | Not Available | Not Available | + | 421161 - 421234 | Not Available |
| Trna-tyr | Not Available | Not Available | + | 421248 - 421329 | Not Available |
| Trna-val | Not Available | Not Available | + | 421362 - 421434 | Not Available |
| Trna-asp | Not Available | Not Available | + | 421455 - 421528 | Not Available |
| dtdp-glucose 4,6-dehydratase | CSX00_01940 | Not Available | + | 421634 - 422064 | 16573.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.