Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudobutyrivibrio ruminis
Accession NumberPDYH00000000.1
Gene Summary
Adenine Count
886960 bp
Thymine Count
912208 bp
Guanine Count
548976 bp
Cytosine Count
584621 bp
Genome Length
2932765 bp
Protein-coding Genes
2628 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX00_01495 | Not Available | - | 312392 - 313000 | 23593.9 |
| mate family efflux transporter | CSX00_01500 | Not Available | - | 313514 - 314884 | 50200.3 |
| homoserine o-succinyltransferase | CSX00_01505 | Not Available | - | 315520 - 316443 | 35828.3 |
| dna ligase (nad(+)) liga | CSX00_01510 | Not Available | - | 316481 - 318484 | 73531.5 |
| 23s rrna pseudouridine synthase f | CSX00_01515 | Not Available | - | 318522 - 319244 | 27270.3 |
| sh3 domain-containing protein | CSX00_01520 | Not Available | - | 319315 - 320592 | 47052.2 |
| Trna-arg | Not Available | Not Available | + | 320614 - 320687 | Not Available |
| shikimate kinase | CSX00_01530 | Not Available | - | 320731 - 321249 | 19163.1 |
| type i 3-dehydroquinate dehydratase | CSX00_01535 | Not Available | - | 321262 - 322017 | 27489.8 |
| shikimate dehydrogenase | CSX00_01540 | Not Available | + | 322163 - 323023 | 31415.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.