Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudobutyrivibrio ruminis
Accession NumberPDYH00000000.1
Gene Summary
Adenine Count
886960 bp
Thymine Count
912208 bp
Guanine Count
548976 bp
Cytosine Count
584621 bp
Genome Length
2932765 bp
Protein-coding Genes
2628 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| magnesium transporter | CSX00_13190 | Not Available | + | 2839183 - 2840571 | 50703.8 |
| ribokinase | CSX00_13195 | Not Available | + | 2840592 - 2841479 | 31915.0 |
| ribonuclease | CSX00_13200 | Not Available | + | 2841683 - 2842966 | 47465.7 |
| diguanylate cyclase | CSX00_13205 | Not Available | + | 2843071 - 2844153 | 40224.6 |
| hypothetical protein | CSX00_13210 | Not Available | + | 2844294 - 2845874 | 59108.9 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | CSX00_13215 | Not Available | + | 2846037 - 2846585 | 19555.4 |
| cysteine--trna ligase | CSX00_13220 | Not Available | + | 2846772 - 2848208 | 54245.1 |
| ribonuclease iii | CSX00_13225 | Not Available | + | 2848193 - 2848633 | 16428.6 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | CSX00_13230 | Not Available | + | 2848794 - 2849543 | 26975.6 |
| rna polymerase subunit sigma-70 | CSX00_13235 | Not Available | + | 2849560 - 2850147 | 22522.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.