Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudobutyrivibrio ruminis
Accession NumberPDYH00000000.1
Gene Summary
Adenine Count
886960 bp
Thymine Count
912208 bp
Guanine Count
548976 bp
Cytosine Count
584621 bp
Genome Length
2932765 bp
Protein-coding Genes
2628 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | CSX00_13140 | Not Available | + | 2826799 - 2827452 | 24940.8 |
| protein tyrosine phosphatase | CSX00_13145 | Not Available | + | 2827541 - 2827993 | 17566.9 |
| biotin--[acetyl-coa-carboxylase] ligase | CSX00_13150 | Not Available | - | 2828017 - 2828802 | 28437.1 |
| 3-isopropylmalate dehydrogenase | CSX00_13155 | Not Available | + | 2828976 - 2830067 | 39611.6 |
| dihydroxy-acid dehydratase | CSX00_13160 | Not Available | + | 2830259 - 2831929 | 58705.2 |
| acetolactate synthase, large subunit, biosynthetic type | CSX00_13165 | Not Available | + | 2832136 - 2833806 | 60592.4 |
| 3-phosphoserine/phosphohydroxythreonine aminotransferase | CSX00_13170 | Not Available | + | 2833820 - 2834902 | 40042.3 |
| 3-phosphoglycerate dehydrogenase | CSX00_13175 | Not Available | + | 2835026 - 2836189 | 41629.2 |
| hypothetical protein | CSX00_13180 | Not Available | + | 2836192 - 2837427 | 46750.7 |
| atp-dependent lon protease | CSX00_13185 | Not Available | + | 2837440 - 2838915 | 54768.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.