Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudobutyrivibrio ruminis
Accession NumberPDYH00000000.1
Gene Summary
Adenine Count
886960 bp
Thymine Count
912208 bp
Guanine Count
548976 bp
Cytosine Count
584621 bp
Genome Length
2932765 bp
Protein-coding Genes
2628 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s1 | CSX00_01195 | Not Available | - | 238298 - 239416 | 40766.5 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CSX00_01200 | Not Available | - | 239404 - 240249 | 31251.2 |
| (d)cmp kinase | CSX00_01205 | Not Available | - | 240277 - 240936 | 23765.4 |
| aminoacetone oxidase family fad-binding enzyme | CSX00_01210 | Not Available | - | 240957 - 242186 | 44507.0 |
| murr/rpir family transcriptional regulator | CSX00_01215 | Not Available | - | 242186 - 243100 | 33904.5 |
| oxaloacetate decarboxylase | CSX00_01220 | Not Available | - | 243189 - 244607 | 52939.6 |
| sodium ion-translocating decarboxylase subunit beta | CSX00_01225 | Not Available | - | 244621 - 245769 | 39927.1 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | CSX00_01230 | Not Available | - | 245784 - 246137 | 11409.7 |
| hypothetical protein | CSX00_01235 | Not Available | - | 246160 - 247086 | 33394.1 |
| carboxyl transferase | CSX00_01240 | Not Available | - | 247105 - 248430 | 46838.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.