Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudobutyrivibrio ruminis
Accession NumberPDYH00000000.1
Gene Summary
Adenine Count
886960 bp
Thymine Count
912208 bp
Guanine Count
548976 bp
Cytosine Count
584621 bp
Genome Length
2932765 bp
Protein-coding Genes
2628 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nickel abc transporter permease subunit nikc | CSX00_12225 | Not Available | - | 2618544 - 2619395 | 30106.5 |
| nickel abc transporter permease subunit nikb | CSX00_12230 | Not Available | - | 2619388 - 2620353 | 36064.3 |
| hypothetical protein | CSX00_12235 | Not Available | - | 2620497 - 2621861 | 48699.8 |
| hypothetical protein | CSX00_12240 | Not Available | - | 2622034 - 2622537 | 19505.6 |
| hypothetical protein | CSX00_12245 | Not Available | - | 2622554 - 2622973 | 14946.0 |
| acyl-coa thioester hydrolase | CSX00_12250 | Not Available | - | 2623005 - 2623412 | 15880.2 |
| methyl-accepting chemotaxis protein | CSX00_12255 | Not Available | - | 2623590 - 2625647 | 73286.4 |
| ecf transporter s component | CSX00_12260 | Not Available | + | 2626045 - 2626566 | 19060.7 |
| ggdef domain-containing protein | CSX00_12265 | Not Available | - | 2626611 - 2628617 | 77576.3 |
| Trna-arg | Not Available | Not Available | + | 2629605 - 2629681 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.