Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudobutyrivibrio ruminis
Accession NumberPDYH00000000.1
Gene Summary
Adenine Count
886960 bp
Thymine Count
912208 bp
Guanine Count
548976 bp
Cytosine Count
584621 bp
Genome Length
2932765 bp
Protein-coding Genes
2628 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator | CSX00_11820 | Not Available | - | 2532476 - 2532859 | 13996.9 |
| sugar abc transporter substrate-binding protein | CSX00_11825 | Not Available | - | 2532960 - 2533958 | 36083.9 |
| methyl-accepting chemotaxis protein | CSX00_11830 | Not Available | - | 2533973 - 2535964 | 72251.4 |
| hydrogenase expression/formation protein hype | CSX00_11835 | Not Available | - | 2536092 - 2537093 | 35550.1 |
| hydrogenase formation protein hypd | CSX00_11840 | Not Available | - | 2537139 - 2538179 | 37452.2 |
| hypc/hybg/hupf family hydrogenase formation chaperone | CSX00_11845 | Not Available | - | 2538179 - 2538388 | 7352.98 |
| hypothetical protein | CSX00_11850 | Not Available | + | 2538816 - 2539157 | 12606.1 |
| butanol dehydrogenase | CSX00_11855 | Not Available | + | 2539318 - 2540535 | 44390.4 |
| dna-binding protein | CSX00_11860 | Not Available | - | 2540583 - 2541347 | 29182.9 |
| glyoxalase | CSX00_11865 | Not Available | - | 2541422 - 2541784 | 14198.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.