Pseudobutyrivibrio ruminis

Gram-positiveMotileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Pseudobutyrivibrio

Description

Pseudobutyrivibrio ruminis is a gram-negative, rod-shaped bacterium classified as a mesophile, thriving optimally at moderate temperatures typically between 30°C and 40°C. As a chemoheterotroph, it derives energy by breaking down organic compounds, primarily found in the gut of ruminant animals such as cattle and sheep, where it plays a crucial role in the digestive process. P. ruminis is an obligate anaerobe, meaning it cannot survive in the presence of oxygen, which is a characteristic shared among many microorganisms that inhabit the gastrointestinal tract. This bacterium is particularly known for its contribution to the fermentation of carbohydrates in the rumen, facilitating the breakdown of complex polysaccharides into short-chain fatty acids, which serve as vital energy sources for the host animal. It is also involved in the production of butyrate—a key metabolite that supports gut health and provides energy for colonocytes. The ability of Pseudobutyrivibrio ruminis to thrive in the anaerobic, nutrient-rich environment of the rumen highlights its adaptive strategies for survival and metabolic efficiency. Moreover, this microbe has been a focus of research due to its potential implications in livestock health and production efficiency. Studies have shown that manipulating the populations of ruminal microbes, including P. ruminis, may improve feed conversion ratios and reduce methane emissions, contributing to more sustainable agricultural practices. The varied interactions of Pseudobutyrivibrio ruminis with other microbial inhabitants in the rumen ecosystem underscore its ecological importance and potential for biotechnological applications in animal husbandry.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusPseudobutyrivibrio
SpeciesPseudobutyrivibrio ruminis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature39
Temperature rangeMesophilic
HabitatAnimal intestinal microflora
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Pseudobutyrivibrio ruminis

Accession NumberPDYH00000000.1

Gene Summary

Adenine Count

886960 bp

Thymine Count

912208 bp

Guanine Count

548976 bp

Cytosine Count

584621 bp

Genome Length

2932765 bp

Protein-coding Genes

2628 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
50s ribosomal protein l28CSX00_01095Not Available-218879 - 2190646704.16
peptidoglycan glycosyltransferaseCSX00_01100Not Available-219169 - 22060252341.4
cell division protein ftswCSX00_01105Not Available-220592 - 22192349133.9
peptidase u32CSX00_01110Not Available-221926 - 22403779236.4
cell division protein zapaCSX00_01115Not Available-224083 - 22450816038.9
holliday junction branch migration dna helicase ruvbCSX00_01120Not Available-224617 - 22563036846.2
holliday junction branch migration protein ruvaCSX00_01125Not Available-225646 - 22626021716.3
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabCSX00_01130Not Available-226286 - 22771654267.7
glutamate-5-semialdehyde dehydrogenaseCSX00_01135Not Available-227735 - 22897944631.5
5-formyltetrahydrofolate cyclo-ligaseCSX00_01140Not Available-228976 - 22956922687.8

Displaying genes 221 – 230 of 2677 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites