Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudobutyrivibrio ruminis
Accession NumberPDYH00000000.1
Gene Summary
Adenine Count
886960 bp
Thymine Count
912208 bp
Guanine Count
548976 bp
Cytosine Count
584621 bp
Genome Length
2932765 bp
Protein-coding Genes
2628 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase | CSX00_10640 | Not Available | + | 2299509 - 2300321 | 29778.8 |
| hd domain-containing protein | CSX00_10645 | Not Available | + | 2300386 - 2300979 | 22635.8 |
| trna 2-thiouridine(34) synthase mnma | CSX00_10650 | Not Available | + | 2300993 - 2302057 | 39669.2 |
| hypothetical protein | CSX00_10655 | Not Available | + | 2302107 - 2303153 | 38878.0 |
| phosphatidylserine synthase | CSX00_10660 | Not Available | + | 2303137 - 2303832 | 25952.5 |
| phosphatidylserine decarboxylase | CSX00_10665 | Not Available | + | 2303833 - 2304651 | 30190.4 |
| abc transporter substrate-binding protein | CSX00_10670 | Not Available | + | 2304825 - 2305646 | 28933.7 |
| amino acid abc transporter permease | CSX00_10675 | Not Available | + | 2305660 - 2306316 | 24480.8 |
| polar amino acid abc transporter atp-binding protein | CSX00_10680 | Not Available | + | 2306345 - 2307097 | 27723.4 |
| sodium/proline symporter | CSX00_10685 | Not Available | + | 2307122 - 2308636 | 54082.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.