Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudobutyrivibrio ruminis
Accession NumberPDYH00000000.1
Gene Summary
Adenine Count
886960 bp
Thymine Count
912208 bp
Guanine Count
548976 bp
Cytosine Count
584621 bp
Genome Length
2932765 bp
Protein-coding Genes
2628 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| threonine ammonia-lyase | CSX00_00490 | Not Available | + | 97557 - 98768 | 43755.8 |
| dna-binding protein | CSX00_00495 | Not Available | + | 98848 - 99183 | 12804.3 |
| signal recognition particle protein | CSX00_00500 | Not Available | + | 99187 - 100524 | 48495.6 |
| 30s ribosomal protein s16 | CSX00_00505 | Not Available | + | 100571 - 100813 | 8918.8 |
| rna-binding protein | CSX00_00510 | Not Available | + | 100842 - 101078 | 8382.38 |
| 16s rrna processing protein rimm | CSX00_00515 | Not Available | + | 101146 - 101664 | 19323.1 |
| trna (guanosine(37)-n1)-methyltransferase trmd | CSX00_00520 | Not Available | + | 101666 - 102367 | 26505.5 |
| 50s ribosomal protein l19 | CSX00_00525 | Not Available | + | 102473 - 102823 | 13212.0 |
| signal peptidase i | CSX00_00530 | Not Available | + | 102932 - 103528 | 22612.1 |
| ribosome biogenesis gtpase ylqf | CSX00_00535 | Not Available | + | 103535 - 104374 | 31408.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.